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The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
(Bmc, 2019)
Background The Critical Assessment of Functional Annotation (CAFA) is an ongoing, global, community-driven effort to evaluate and improve the computational annotation of protein function. Results Here, we report on the ...
Large-scale automated function prediction of protein sequences and an experimental case study validation on PTEN transcript variants
(Wiley, 2018)
Recent advances in computing power and machine learning empower functional annotation of protein sequences and their transcript variations. Here, we present an automated prediction system UniGOPred, for GO annotations and ...
ProFAB—open protein functional annotation benchmark
(Oxford University Press, 2023)
As the number of protein sequences increases in biological databases, computational methods are required to provide accurate functional annotation with high coverage. Although several machine learning methods have been ...