Browsing Araştırma Çıktıları | Web of Science by Author "0000-0001-5454-2815"

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DEEPred: Automated Protein Function Prediction with Multi-task Feed-forward Deep Neural Networks

Rifaioğlu, Ahmet Süreyya; Doğan, Tunca; Martin, Maria Jesus; Çetin-Atalay, Rengül; Atalay, Volkan (Nature Publishing Group, 2019)

Automated protein function prediction is critical for the annotation of uncharacterized protein sequences, where accurate prediction methods are still required. Recently, deep learning based methods have outperformed ...
Large-scale automated function prediction of protein sequences and an experimental case study validation on PTEN transcript variants

Rifaioğlu, Ahmet Süreyya; Doğan, Tunca; Saraç, Ömer Sinan; Erşahin, Tülin; Saidi, Rabie; Atalay, Mehmet Volkan; Martin, Maria Jesus; Atalay, Rengül Çetin (Wiley, 2018)

Recent advances in computing power and machine learning empower functional annotation of protein sequences and their transcript variations. Here, we present an automated prediction system UniGOPred, for GO annotations and ...